Pedixplorer - Pedigree Functions
Routines to handle family data with a Pedigree object. The initial purpose was to create correlation structures that describe family relationships such as kinship and identity-by-descent, which can be used to model family data in mixed effects models, such as in the coxme function. Also includes a tool for Pedigree drawing which is focused on producing compact layouts without intervention. Recent additions include utilities to trim the Pedigree object with various criteria, and kinship for the X chromosome.
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softwaredatarepresentationgeneticsgraphandnetworkvisualizationkinshippedigree
5.36 score 7 stars 1 dependents 18 scripts 322 downloadsnfcore.utils - Utilities for Nf-Core Modules
Provides utility functions to facilitate the use of R within nf-core modules. The package helps parse Nextflow inputs and perform validation checks to ensure correct parameter handling and reproducible execution.
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nextflownextflow-modulesnf-core
4.48 score 2 stars 8 scripts 297 downloads